ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54D08_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54D08_F1_nD1

Q54D08_F1_nD1

UID: 003264890

AlphaFold

Range: 1-304
AlphaFold: AF-Q54D08
UniProt: Q54D08 (all domains)
Gene: lst8

Protein: Protein LST8 homolog (Lethal with sec thirteen 8 protein)

3D Structure

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Related Domains

Browse other domains in WD40, Beta-prop_IFT122_1st →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyWD40, Beta-prop_IFT122_1st(5.1.5.80)

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF23381Beta-prop_IFT122_1st

IFT122 first beta-propeller

ClanCL0186Beta_propeller

External Links

AlphaFold DB: Q54D08 UniProt: Q54D08

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-304