ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54M80_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54M80_F1_nD1

Q54M80_F1_nD1

UID: 003265368

AlphaFold

Range: 1-35,56-240,286-480
AlphaFold: AF-Q54M80
UniProt: Q54M80 (all domains)
Gene: DDB_G0286165

Protein: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Peptidase_M48,Peptidase_M48_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M48,Peptidase_M48_N(2498.1.1.11)

Pfam Families

PF01435Peptidase_M48

Peptidase family M48

ClanCL0126Peptidase_MA

PF16491Peptidase_M48_N

CAAX prenyl protease N-terminal, five membrane helices

External Links

AlphaFold DB: Q54M80 UniProt: Q54M80

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-35,56-240,286-480