ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54WV4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54WV4_F1_nD2

Q54WV4_F1_nD2

UID: 003266343

AlphaFold

Range: 496-555
AlphaFold: AF-Q54WV4
UniProt: Q54WV4 (all domains)
Gene: gtf2f1

Protein: General transcription factor IIF subunit 1 (Transcription initiation factor IIF subunit alpha) (TFIIF-alpha)

3D Structure

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Related Domains

Browse other domains in WHD_SOWAH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyWHD_SOWAH(101.1.2.512)

Pfam Families

PF25877WHD_SOWAH

SOWAH N-terminal winged helix-turn-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: Q54WV4 UniProt: Q54WV4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 496-555