ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54WV4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54WV4_F1_nD1

Q54WV4_F1_nD1

UID: 003266344

AlphaFold

Range: 11-50,131-200
AlphaFold: AF-Q54WV4
UniProt: Q54WV4 (all domains)
Gene: gtf2f1

Protein: General transcription factor IIF subunit 1 (Transcription initiation factor IIF subunit alpha) (TFIIF-alpha)

3D Structure

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Related Domains

Browse other domains in TFIIF_alpha →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupRap30/74 interaction domains-like(59.1.1)

FFamilyTFIIF_alpha(59.1.1.3)

Pfam Families

PF05793TFIIF_alpha

Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)

ClanCL0123HTH

External Links

AlphaFold DB: Q54WV4 UniProt: Q54WV4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-50,131-200