ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54SD4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54SD4_F1_nD1

Q54SD4_F1_nD1

UID: 003266375

AlphaFold

Range: 1-423
AlphaFold: AF-Q54SD4
UniProt: Q54SD4 (all domains)
Gene: rbbD

Protein: Probable histone-binding protein rbbD

3D Structure

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Related Domains

Browse other domains in WD40,CAF1C_H4-bd →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40,CAF1C_H4-bd(5.1.4.5)

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF12265CAF1C_H4-bd

Histone-binding protein RBBP4 or subunit C of CAF1 complex

ClanCL0186Beta_propeller

External Links

AlphaFold DB: Q54SD4 UniProt: Q54SD4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-423