ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54HN9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54HN9_F1_nD2

Q54HN9_F1_nD2

UID: 003267079

AlphaFold

Range: 101-195
AlphaFold: AF-Q54HN9
UniProt: Q54HN9 (all domains)
Gene: DDB_G0289333

Protein: HTH La-type RNA-binding domain-containing protein

3D Structure

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Related Domains

Browse other domains in RRM_LARP4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_LARP4(304.9.1.86)

Pfam Families

PF26088RRM_LARP4

La-related protein 4-like, RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q54HN9 UniProt: Q54HN9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-195