ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54W16_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54W16_F1_nD1

Q54W16_F1_nD1

UID: 003270425

AlphaFold

Range: 81-275
AlphaFold: AF-Q54W16
UniProt: Q54W16 (all domains)
Gene: DDB_G0279967

Protein: U6 snRNA phosphodiesterase 1 (3'-5' RNA exonuclease USB1) (EC 4.6.1.-)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyHVSL(264.1.1.6)

Pfam Families

Uncharacterised conserved protein

ClanCL02472H

External Links

AlphaFold DB: Q54W16 UniProt: Q54W16

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-275