ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54Q40_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54Q40_F1_nD1

Q54Q40_F1_nD1

UID: 003270549

AlphaFold

Range: 11-125
AlphaFold: AF-Q54Q40
UniProt: Q54Q40 (all domains)
Gene: DG1039

Protein: Probable ubiquitin thioesterase DG1039 (EC 3.4.19.-) (Developmental gene 1039 protein)

3D Structure

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Related Domains

Browse other domains in USP8_dimer →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupUSP8 N-terminal domain-like(604.13)

TT-groupUSP8 N-terminal domain-like(604.13.1)

FFamilyUSP8_dimer(604.13.1.1)

Pfam Families

PF08969USP8_dimer

USP8 dimerisation domain

External Links

AlphaFold DB: Q54Q40 UniProt: Q54Q40

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-125