ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ngkA1 - ECOD Domain | ECOD

ECOD/Domains/e1ngkA1

e1ngkA1

UID: 000003271

RepresentativePDB

Range: A:3-128
PDB: 1NGK chain A(all domains)
UniProt: P9WN23 (all domains)
Gene: glbO

Molecule: Hemoglobin-like protein HbO

3D Structure

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Related Domains

Browse other domains in Bac_globin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyBac_globin(106.1.1.3)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Cyanide ionCYN

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF01152Bac_globin

Bacterial-like globin

ClanCL0090Globin

External Links

ECOD PDB View: 1NGK RCSB PDB: 1NGK PDBe: 1NGK UniProt: P9WN23

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.