ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q55GM6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q55GM6_F1_nD2

Q55GM6_F1_nD2

UID: 003271046

AlphaFold

Range: 56-110,131-170
AlphaFold: AF-Q55GM6
UniProt: Q55GM6 (all domains)
Gene: mserS

Protein: serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in Seryl_tRNA_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-grouptRNA-binding arm(192.7)

TT-grouptRNA-binding arm(192.7.1)

FFamilySeryl_tRNA_N(192.7.1.2)

Pfam Families

PF02403Seryl_tRNA_N

Seryl-tRNA synthetase N-terminal domain

ClanCL0298tRNA_bind_arm

External Links

AlphaFold DB: Q55GM6 UniProt: Q55GM6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-110,131-170