ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54B09_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54B09_F1_nD3

Q54B09_F1_nD3

UID: 003271805

AlphaFold

Range: 441-670,966-975
AlphaFold: AF-Q54B09
UniProt: Q54B09 (all domains)
Gene: DDB_G0293988

Protein: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in SPG48, TPR_AP5Z1_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySPG48, TPR_AP5Z1_C(109.4.1.1724)

Pfam Families

AP-5 complex subunit, vesicle trafficking

ClanCL0020TPR

PF25154TPR_AP5Z1_C

AP-5 complex subunit zeta-1, C-terminal TPR repeats

ClanCL0020TPR

External Links

AlphaFold DB: Q54B09 UniProt: Q54B09

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 441-670,966-975