ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54EQ8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54EQ8_F1_nD3

Q54EQ8_F1_nD3

UID: 003272035

AlphaFold

Range: 1416-2035
AlphaFold: AF-Q54EQ8
UniProt: Q54EQ8 (all domains)
Gene: nup98

Protein: Nuclear pore complex protein Nup98-Nup96 [Cleaved into: Nuclear pore complex protein Nup98 (Nucleoporin Nup98); Nuclear pore complex protein Nup96 (Nucleoporin Nup96)]

3D Structure

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Related Domains

Browse other domains in Nup96 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilyNup96(109.21.1.2)

Pfam Families

Nuclear protein 96

External Links

AlphaFold DB: Q54EQ8 UniProt: Q54EQ8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1416-2035