ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q54LQ0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54LQ0_F1_nD3

Q54LQ0_F1_nD3

UID: 003272340

AlphaFold

Range: 156-255,341-465
AlphaFold: AF-Q54LQ0
UniProt: Q54LQ0 (all domains)
Gene: DDB_G0286505

Protein: DUF171 family protein

3D Structure

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Related Domains

Browse other domains in Methyltrn_RNA_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyMethyltrn_RNA_3(2488.1.1.6)

Pfam Families

PF02598Methyltrn_RNA_3

Putative RNA methyltransferase

ClanCL0098SPOUT

External Links

AlphaFold DB: Q54LQ0 UniProt: Q54LQ0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-255,341-465