ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54TM9_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q54TM9_F1_nD5

Q54TM9_F1_nD5

UID: 003272469

AlphaFold

Range: 861-889
AlphaFold: AF-Q54TM9
UniProt: Q54TM9 (all domains)
Gene: DDB_G0281657

Protein: RING-type E3 ubiquitin transferase

3D Structure

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Related Domains

Browse other domains in zf-CCCH →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCCH zinc finger(906)

HH-groupCCCH zinc finger(906.1)

TT-groupCCCH zinc finger(906.1.1)

FFamilyzf-CCCH(906.1.1.1)

Pfam Families

PF00642zf-CCCH

Zinc finger C-x8-C-x5-C-x3-H type (and similar)

ClanCL0537CCCH_zf

External Links

AlphaFold DB: Q54TM9 UniProt: Q54TM9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 861-889