ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54LZ6_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q54LZ6_F1_nD6

Q54LZ6_F1_nD6

UID: 003272917

AlphaFold

Range: 551-605
AlphaFold: AF-Q54LZ6
UniProt: Q54LZ6 (all domains)
Gene: DDB_G0286289

Protein: RBR-type E3 ubiquitin transferase (EC 2.3.2.31)

3D Structure

Loading viewer...

Related Domains

Browse other domains in IBR_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupIBR domain(376.1.6)

FFamilyIBR_1(376.1.6.2)

Pfam Families

IBR domain

ClanCL0229RING

External Links

AlphaFold DB: Q54LZ6 UniProt: Q54LZ6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 551-605