ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54QB8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54QB8_F1_nD3

Q54QB8_F1_nD3

UID: 003272977

AlphaFold

Range: 741-1035
AlphaFold: AF-Q54QB8
UniProt: Q54QB8 (all domains)
Gene: msh4

Protein: DNA mismatch repair proteins mutS family domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in MutS_V →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMutS_V(2004.1.1.45)

Pfam Families

MutS domain V

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q54QB8 UniProt: Q54QB8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 741-1035