ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q55GD9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q55GD9_F1_nD2

Q55GD9_F1_nD2

UID: 003273121

AlphaFold

Range: 116-190
AlphaFold: AF-Q55GD9
UniProt: Q55GD9 (all domains)
Gene: vps25

Protein: Vacuolar protein-sorting-associated protein 25 (ESCRT-II complex subunit VPS25)

3D Structure

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Related Domains

Browse other domains in ESCRT-II →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyESCRT-II(101.1.2.77)

Pfam Families

PF05871ESCRT-II

ESCRT-II complex subunit

ClanCL0123HTH

External Links

AlphaFold DB: Q55GD9 UniProt: Q55GD9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-190