ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54RK3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54RK3_F1_nD2

Q54RK3_F1_nD2

UID: 003273271

AlphaFold

Range: 76-100,131-275
AlphaFold: AF-Q54RK3
UniProt: Q54RK3 (all domains)
Gene: DDB_G0283133

Protein: Integrase catalytic domain-containing protein

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

AlphaFold DB: Q54RK3 UniProt: Q54RK3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-100,131-275