ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54BK0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54BK0_F1_nD3

Q54BK0_F1_nD3

UID: 003273918

AlphaFold

Range: 1321-1385
AlphaFold: AF-Q54BK0
UniProt: Q54BK0 (all domains)
Gene: nfx1

Protein: Transcriptional repressor NF-X1 homolog

3D Structure

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Related Domains

Browse other domains in RRM_R3HCC1L →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_R3HCC1L(304.9.1.84)

Pfam Families

PF28975RRM_R3HCC1L

R3HCC1L-like, RNA-recognition domain

ClanCL0221RRM

External Links

AlphaFold DB: Q54BK0 UniProt: Q54BK0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1321-1385