ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54LQ2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54LQ2_F1_nD3

Q54LQ2_F1_nD3

UID: 003274087

AlphaFold

Range: 451-515
AlphaFold: AF-Q54LQ2
UniProt: Q54LQ2 (all domains)
Gene: DDB_G0286503

Protein: Integrase catalytic domain-containing protein

3D Structure

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Related Domains

Browse other domains in Integrase_p58_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyIntegrase_p58_C(4.1.1.224)

Pfam Families

PF22938Integrase_p58_C

Integrase p58, C-terminal domain

ClanCL0010SH3

External Links

AlphaFold DB: Q54LQ2 UniProt: Q54LQ2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 451-515