ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54S40_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54S40_F1_nD2

Q54S40_F1_nD2

UID: 003274560

AlphaFold

Range: 701-750,791-875
AlphaFold: AF-Q54S40
UniProt: Q54S40 (all domains)
Gene: gbpD

Protein: Cyclic GMP-binding protein D (Guanine nucleotide exchange factor for rap1) (Ras guanine nucleotide exchange factor U) (RasGEF domain-containing protein U)

3D Structure

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Related Domains

Browse other domains in cNMP_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilycNMP_binding(10.12.1.1)

Pfam Families

PF00027cNMP_binding

Cyclic nucleotide-binding domain

ClanCL0029Cupin

External Links

AlphaFold DB: Q54S40 UniProt: Q54S40

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 701-750,791-875