ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54NM0_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q54NM0_F1_nD6

Q54NM0_F1_nD6

UID: 003274612

AlphaFold

Range: 496-530,601-810,831-885,906-1135,1161-1180
AlphaFold: AF-Q54NM0
UniProt: Q54NM0 (all domains)
Gene: DDB_G0285205

Protein: SNF2-related domain-containing protein

3D Structure

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Related Domains

Browse other domains in SNF2-rel_dom, Helicase_C, HDA2-3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySNF2-rel_dom, Helicase_C, HDA2-3(2004.1.1.428)

Pfam Families

PF00176SNF2-rel_dom

SNF2-related domain

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

Class II histone deacetylase complex subunits 2 and 3

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q54NM0 UniProt: Q54NM0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 496-530,601-810,831-885,906-1135,1161-1180