ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54EK0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54EK0_F1_nD2

Q54EK0_F1_nD2

UID: 003275405

AlphaFold

Range: 241-290,666-980,1031-1240
UniProt: Q54EK0 (all domains)
Gene: vps8

Protein: RING zinc finger-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps8 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps8(109.4.1.570)

Pfam Families

PF12816TPR_Vps8

Vps8 central TPR

ClanCL0020TPR

External Links

UniProt: Q54EK0

Downloads