ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q75JP6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q75JP6_F1_nD1

Q75JP6_F1_nD1

UID: 003275717

AlphaFold

Range: 66-290,361-385,416-460,496-515
AlphaFold: AF-Q75JP6
UniProt: Q75JP6 (all domains)
Gene: DDB_G0272470

Protein: Nonsense-mediated mRNA decay factor SMG8

3D Structure

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Related Domains

Browse other domains in Smg8_Smg9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySmg8_Smg9(2004.1.1.171)

Pfam Families

PF10220Smg8_Smg9

Smg8_Smg9

External Links

AlphaFold DB: Q75JP6 UniProt: Q75JP6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-290,361-385,416-460,496-515