ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q86KU2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q86KU2_F1_nD3

Q86KU2_F1_nD3

UID: 003276331

AlphaFold

Range: 96-320,466-540,586-720
AlphaFold: AF-Q86KU2
UniProt: Q86KU2 (all domains)
Gene: valS1

Protein: Probable valine--tRNA ligase, cytoplasmic (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1(2005.1.1.1)

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

External Links

AlphaFold DB: Q86KU2 UniProt: Q86KU2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-320,466-540,586-720