ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54VF1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54VF1_F1_nD1

Q54VF1_F1_nD1

UID: 003276365

AlphaFold

Range: 1-355,426-535,576-585
AlphaFold: AF-Q54VF1
UniProt: Q54VF1 (all domains)
Gene: ddx56

Protein: Probable ATP-dependent RNA helicase ddx56 (EC 3.6.4.13) (DEAD box protein 56)

3D Structure

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Related Domains

Browse other domains in DEAD+Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD+Helicase_C(2004.1.1.364)

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q54VF1 UniProt: Q54VF1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-355,426-535,576-585