ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q86HL5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q86HL5_F1_nD1

Q86HL5_F1_nD1

UID: 003276866

AlphaFold

Range: 6-460
AlphaFold: AF-Q86HL5
UniProt: Q86HL5 (all domains)
Gene: hgsB

Protein: Hydroxymethylglutaryl-CoA synthase B (HMG-CoA synthase B) (EC 2.3.3.10) (3-hydroxy-3-methylglutaryl coenzyme A synthase B)

3D Structure

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Related Domains

Browse other domains in HMG_CoA_synt_N, HMG_CoA_synt_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyHMG_CoA_synt_N, HMG_CoA_synt_C(7581.1.1.27)

Pfam Families

PF01154HMG_CoA_synt_N

Hydroxymethylglutaryl-coenzyme A synthase N terminal

ClanCL0046Thiolase

PF08540HMG_CoA_synt_C

Hydroxymethylglutaryl-coenzyme A synthase C terminal

ClanCL0046Thiolase

External Links

AlphaFold DB: Q86HL5 UniProt: Q86HL5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-460