ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54RQ4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54RQ4_F1_nD2

Q54RQ4_F1_nD2

UID: 003276953

AlphaFold

Range: 161-235
AlphaFold: AF-Q54RQ4
UniProt: Q54RQ4 (all domains)
Gene: hcpB

Protein: Chromo domain-containing protein

3D Structure

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Related Domains

Browse other domains in Chromo_shadow →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupChromo domain-like(4.8)

TT-groupChromo domain-like(4.8.1)

FFamilyChromo_shadow(4.8.1.2)

Pfam Families

PF01393Chromo_shadow

Chromo shadow domain

ClanCL0010SH3

External Links

AlphaFold DB: Q54RQ4 UniProt: Q54RQ4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 161-235