ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54RB1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54RB1_F1_nD2

Q54RB1_F1_nD2

UID: 003277146

AlphaFold

Range: 36-390
AlphaFold: AF-Q54RB1
UniProt: Q54RB1 (all domains)
Gene: DDB_G0283281

Protein: Strictosidine synthase family protein

3D Structure

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Related Domains

Browse other domains in Str_synth, SGL, SSL_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyStr_synth, SGL, SSL_N(5.1.3.139)

Pfam Families

PF03088Str_synth

Strictosidine synthase

ClanCL0186Beta_propeller

SMP-30/Gluconolactonase/LRE-like region

ClanCL0186Beta_propeller

Strictosidine synthase-like, N-terminal

ClanCL0186Beta_propeller

External Links

AlphaFold DB: Q54RB1 UniProt: Q54RB1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-390