ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54ND8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54ND8_F1_nD1

Q54ND8_F1_nD1

UID: 003277406

AlphaFold

Range: 61-125
AlphaFold: AF-Q54ND8
UniProt: Q54ND8 (all domains)
Gene: DDB_G0285333

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in zf-C3HC4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4(376.1.1.1)

Pfam Families

PF00097zf-C3HC4

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

AlphaFold DB: Q54ND8 UniProt: Q54ND8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-125