ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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K0F3Y3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/K0F3Y3_F1_nD1

K0F3Y3_F1_nD1

UID: 003279049

AlphaFold

Range: 21-120
AlphaFold: AF-K0F3Y3
UniProt: K0F3Y3 (all domains)
Gene: O3I_029430

Protein: RNA polymerase sigma factor SigD

3D Structure

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Related Domains

Browse other domains in Sigma70_r2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSigma2 domain-like(142)

HH-groupSigma2 domain of RNA polymerase sigma factors(142.1)

TT-groupSigma2 domain of RNA polymerase sigma factors(142.1.1)

FFamilySigma70_r2(142.1.1.3)

Pfam Families

PF04542Sigma70_r2

Sigma-70 region 2

ClanCL0123HTH

External Links

AlphaFold DB: K0F3Y3 UniProt: K0F3Y3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-120