ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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K0EQQ8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/K0EQQ8_F1_nD2

K0EQQ8_F1_nD2

UID: 003281471

AlphaFold

Range: 106-185
AlphaFold: AF-K0EQQ8
UniProt: K0EQQ8 (all domains)
Gene: O3I_009480

Protein: RNA polymerase sigma factor SigK

3D Structure

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Related Domains

Browse other domains in Sigma70_r4_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma70_r4_2(101.1.1.42)

Pfam Families

PF08281Sigma70_r4_2

Sigma-70, region 4

ClanCL0123HTH

External Links

AlphaFold DB: K0EQQ8 UniProt: K0EQQ8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-185