ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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K0ERQ1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/K0ERQ1_F1_nD2

K0ERQ1_F1_nD2

UID: 003283412

AlphaFold

Range: 416-475
AlphaFold: AF-K0ERQ1
UniProt: K0ERQ1 (all domains)
Gene: O3I_011105

Protein: Ribonuclease R

3D Structure

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Related Domains

Browse other domains in RNase_II_C_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRNase_II_C_S1(2.1.1.98)

Pfam Families

PF18614RNase_II_C_S1

RNase II-type exonuclease C-terminal S1 domain

ClanCL0021OB

External Links

AlphaFold DB: K0ERQ1 UniProt: K0ERQ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 416-475