ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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K0ETH6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/K0ETH6_F1_nD2

K0ETH6_F1_nD2

UID: 003291331

AlphaFold

Range: 111-190
AlphaFold: AF-K0ETH6
UniProt: K0ETH6 (all domains)
Gene: O3I_005040

Protein: RNA polymerase sigma factor SigK

3D Structure

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Related Domains

Browse other domains in Sigma70_r4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma70_r4(101.1.1.31)

Pfam Families

PF04545Sigma70_r4

Sigma-70, region 4

ClanCL0123HTH

External Links

AlphaFold DB: K0ETH6 UniProt: K0ETH6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-190