ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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I1JGH3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1JGH3_F1_nD1

I1JGH3_F1_nD1

UID: 003292337

AlphaFold

Range: 6-85
AlphaFold: AF-I1JGH3
UniProt: I1JGH3 (all domains)
Gene: PUB8

Protein: U-box domain-containing protein (EC 2.3.2.27) (RING-type E3 ubiquitin transferase PUB)

3D Structure

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Related Domains

Browse other domains in U-box →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyU-box(376.1.1.8)

Pfam Families

U-box domain

ClanCL0229RING

External Links

AlphaFold DB: I1JGH3 UniProt: I1JGH3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-85