ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JJR8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1JJR8_F1_nD1

I1JJR8_F1_nD1

UID: 003295741

AlphaFold

Range: 26-389
AlphaFold: AF-I1JJR8
UniProt: I1JJR8 (all domains)
Gene: GLYMA_02G307000

Protein: Polygalacturonase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_28 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyGlyco_hydro_28(207.2.1.1)

Pfam Families

PF00295Glyco_hydro_28

Glycosyl hydrolases family 28

ClanCL0268Pec_lyase-like

External Links

AlphaFold DB: I1JJR8 UniProt: I1JJR8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-389