ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JE93_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1JE93_F1_nD1

I1JE93_F1_nD1

UID: 003302499

AlphaFold

Range: 11-70
AlphaFold: AF-I1JE93
UniProt: I1JE93 (all domains)
Gene: LOC100791930

Protein: Ribosomal RNA-processing protein 40

3D Structure

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Related Domains

Browse other domains in RRP40_N_mamm →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupRibosomal L27 protein(325.1.8)

FFamilyRRP40_N_mamm(325.1.8.4)

Pfam Families

PF21261RRP40_N_mamm

Mammalian exosome complex component RRP40, N-terminal

ClanCL0105Hybrid

External Links

AlphaFold DB: I1JE93 UniProt: I1JE93

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-70