ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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I1JJW0_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/I1JJW0_F1_nD4

I1JJW0_F1_nD4

UID: 003302993

AlphaFold

Range: 601-685
AlphaFold: AF-I1JJW0
UniProt: I1JJW0 (all domains)
Gene: LOC100792100

Protein: Protein NLP2

3D Structure

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Related Domains

Browse other domains in PB1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyPB1(221.1.1.4)

Pfam Families

PB1 domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: I1JJW0 UniProt: I1JJW0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 601-685