ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

I1NID9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/I1NID9_F1_nD4

I1NID9_F1_nD4

UID: 003304615

AlphaFold

Range: 516-605
AlphaFold: AF-I1NID9
UniProt: I1NID9 (all domains)
Gene: LOC100793400

Protein: Zinc finger PHD-type domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ubiquitin_At1g33420 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_At1g33420(221.1.1.167)

Pfam Families

PF25565Ubiquitin_At1g33420

At1g33420-like, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: I1NID9 UniProt: I1NID9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 516-605