ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1MBZ8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1MBZ8_F1_nD2

I1MBZ8_F1_nD2

UID: 003306271

AlphaFold

Range: 241-480
AlphaFold: AF-I1MBZ8
UniProt: I1MBZ8 (all domains)
Gene: LOC100780683

Protein: tRNA pseudouridine(55) synthase (EC 5.4.99.25) (tRNA pseudouridine 55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)

3D Structure

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Related Domains

Browse other domains in Pus10_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPus10_C(304.102.1.7)

Pfam Families

PF21238Pus10_C

Pus10, C-terminal

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: I1MBZ8 UniProt: I1MBZ8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 241-480