ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JDG3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1JDG3_F1_nD2

I1JDG3_F1_nD2

UID: 003306964

AlphaFold

Range: 86-390
AlphaFold: AF-I1JDG3
UniProt: I1JDG3 (all domains)
Gene: LOC100811783

Protein: U-box domain-containing protein (EC 2.3.2.27) (RING-type E3 ubiquitin transferase PUB)

3D Structure

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Related Domains

Browse other domains in ARM_PUB →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyARM_PUB(109.4.1.1146)

Pfam Families

PF25598ARM_PUB

Plant U-box protein ARM repeat region

ClanCL0020TPR

External Links

AlphaFold DB: I1JDG3 UniProt: I1JDG3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-390