ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1K5W4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/I1K5W4_F1_nD3

I1K5W4_F1_nD3

UID: 003307120

AlphaFold

Range: 441-520
AlphaFold: AF-I1K5W4
UniProt: I1K5W4 (all domains)
Gene: GLYMA_05G229600

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in U-box →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyU-box(376.1.1.8)

Pfam Families

U-box domain

ClanCL0229RING

External Links

AlphaFold DB: I1K5W4 UniProt: I1K5W4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 441-520