ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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I1JFV5_F1_nD16 - ECOD Domain | ECOD

ECOD/Domains/I1JFV5_F1_nD16

I1JFV5_F1_nD16

UID: 003309438

AlphaFold

Range: 1616-1910
UniProt: I1JFV5 (all domains)
Gene: LOC100793149

Protein: rRNA biogenesis protein RRP5 (Ribosomal RNA-processing protein 5)

3D Structure

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Related Domains

Browse other domains in Suf, HAT_Syf1_CNRKL1_N, HAT_PRP39_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySuf, HAT_Syf1_CNRKL1_N, HAT_PRP39_C(109.4.1.2931)

Pfam Families

Suppressor of forked protein (Suf)

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

PF23241HAT_PRP39_C

PRP39 C-terminal HAT repeat

ClanCL0020TPR

External Links

UniProt: I1JFV5

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