ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

I1M5C5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1M5C5_F1_nD1

I1M5C5_F1_nD1

UID: 003311011

AlphaFold

Range: 6-285
AlphaFold: AF-I1M5C5
UniProt: I1M5C5 (all domains)
Gene: GLYMA_13G350400

Protein: Protein ROOT HAIR DEFECTIVE 3 homolog (EC 3.6.5.-) (Protein SEY1 homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RHD3_GTPase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRHD3_GTPase(2004.1.1.133)

Pfam Families

PF05879RHD3_GTPase

Root hair defective 3 GTP-binding protein (RHD3) GTPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: I1M5C5 UniProt: I1M5C5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-285