ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1M5C5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1M5C5_F1_nD2

I1M5C5_F1_nD2

UID: 003311021

AlphaFold

Range: 286-675
AlphaFold: AF-I1M5C5
UniProt: I1M5C5 (all domains)
Gene: GLYMA_13G350400

Protein: Protein ROOT HAIR DEFECTIVE 3 homolog (EC 3.6.5.-) (Protein SEY1 homolog)

3D Structure

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Related Domains

Browse other domains in Sey1_3HB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupInterferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain(621)

HH-groupInterferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain(621.1)

TT-groupInterferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain(621.1.1)

FFamilySey1_3HB(621.1.1.3)

Pfam Families

PF20428Sey1_3HB

Sey1 three-helix bundle domain

External Links

AlphaFold DB: I1M5C5 UniProt: I1M5C5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-675