ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JQN9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1JQN9_F1_nD2

I1JQN9_F1_nD2

UID: 003314236

AlphaFold

Range: 326-490,521-540
AlphaFold: AF-I1JQN9
UniProt: I1JQN9 (all domains)
Gene: LOC100786637

Protein: Putative GTP diphosphokinase RSH1, chloroplastic (EC 2.7.6.5) (RelA/SpoT homolog 1) (ppGpp synthetase RSH1)

3D Structure

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Related Domains

Browse other domains in RelA_SpoT →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyRelA_SpoT(316.1.1.13)

Pfam Families

PF04607RelA_SpoT

Region found in RelA / SpoT proteins

ClanCL0260NTP_transf

External Links

AlphaFold DB: I1JQN9 UniProt: I1JQN9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 326-490,521-540