ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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K7MVF2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/K7MVF2_F1_nD1

K7MVF2_F1_nD1

UID: 003315182

AlphaFold

Range: 6-190,346-400
AlphaFold: AF-K7MVF2
UniProt: K7MVF2 (all domains)
Gene: LOC100807673

Protein: DNA ligase (EC 6.5.1.1)

3D Structure

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Related Domains

Browse other domains in DRMBL,Lactamase_B_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyDRMBL,Lactamase_B_2(247.1.1.10)

Pfam Families

DNA repair metallo-beta-lactamase

ClanCL0398RMMBL_DRMBL

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

AlphaFold DB: K7MVF2 UniProt: K7MVF2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-190,346-400