ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JNL8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1JNL8_F1_nD1

I1JNL8_F1_nD1

UID: 003316961

AlphaFold

Range: 156-235
AlphaFold: AF-I1JNL8
UniProt: I1JNL8 (all domains)
Gene: LOC100782225

Protein: E3 ubiquitin-protein ligase RMA (EC 2.3.2.27) (Protein RING membrane-anchor) (RING-type E3 ubiquitin transferase RMA)

3D Structure

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Related Domains

Browse other domains in zf-RING_UBOX →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-RING_UBOX(376.1.1.20)

Pfam Families

PF13445zf-RING_UBOX

RING-type zinc-finger

ClanCL0229RING

External Links

AlphaFold DB: I1JNL8 UniProt: I1JNL8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-235