ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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S4UQS3_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/S4UQS3_F1_nD5

S4UQS3_F1_nD5

UID: 003317467

AlphaFold

Range: 376-430
AlphaFold: AF-S4UQS3
UniProt: S4UQS3 (all domains)
Gene: RTRP2

Protein: RBR-type E3 ubiquitin transferase (EC 2.3.2.31)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupAriadne-1 protein homolog(376.1.4)

FFamilyIBR(376.1.4.1)

Pfam Families

IBR domain, a half RING-finger domain

ClanCL0229RING

External Links

AlphaFold DB: S4UQS3 UniProt: S4UQS3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 376-430