ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0R0JYQ1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0R0JYQ1_F1_nD1

A0A0R0JYQ1_F1_nD1

UID: 003319402

AlphaFold

Range: 51-140
UniProt: A0A0R0JYQ1 (all domains)
Gene: GLYMA_05G080000

Protein: CCHC-type domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Retrotran_gag_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyRetrotran_gag_2(170.1.1.15)

Pfam Families

PF14223Retrotran_gag_2

gag-polypeptide of LTR copia-type

ClanCL0523GAG-polyprotein

External Links

UniProt: A0A0R0JYQ1

Downloads